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Species belonging to selected taxon:

Gadus morhua



ABOUT THIS RECORD

ID: MNEST007410
species: Gadus morhua
miRNA family: let-7
source: miRNEST

Taxonomy by NCBI:
Gadus morhua Gadus Gadidae Gadiformes Paracanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTGGTATTAGGTTGTTTAGC

miRNA*
AAAACAACAAACACAACAAA

mismatches: 4
bulges: 1

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pre-miRNA
ATGAAAGTACAGTAAAACAACAAACACAACAAAAAAAAATACAATTTGATTAATGCATTAGATATACCCCTAAAAAAGATATAAAAACGTGTTTTTATGT
GCATCTCTAATTGTGTGCTGCAATAAAAGCACCAGTGTGGTATTAGGTTGTTTAGCACCAGTGAAT


dot-bracket secondary structure
((....))...((.(((((((.((.((.(((.........((((((.((...((((((((((.((((.....................)))).)))).))
)))).)).))))))(((((........)))))...))).)).))..))))))).))..........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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