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Species belonging to selected taxon:

Gadus morhua



ABOUT THIS RECORD

ID: MNEST007411
species: Gadus morhua
miRNA family: miR-3600
source: miRNEST

Taxonomy by NCBI:
Gadus morhua Gadus Gadidae Gadiformes Paracanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACAGTTCTTCAGCTGGCAGCT

miRNA*
CTTGCCAGTGAAGAACTGATG

mismatches: 1
bulges: 2

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pre-miRNA
AGCCAACCACAACAGTTCTTCAGCTGGCAGCTTTAGTTGGTACATATGACATAAAGCTTGCCAGTGAAGAACTGATGTGGGTCAG

dot-bracket secondary structure
......(((((.((((((((((.((((((((((((((((.......)))).)))))).)))))))))))))))).))))).....


SIMILARITIES
miRBase dre-mir-22a: 1e-24

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-22: 5e-21
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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