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Species belonging to selected taxon:

Gallus gallus, Meleagris gallopavo



ABOUT THIS RECORD

ID: MNEST006793
species: Gallus gallus
miRNA family: miR-181b
source: miRNEST

Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTCACTGAACAATGAATGCAA

miRNA*
ACATTCATTGCTGTCGGTGGGTT

mismatches: 4
bulges: 2

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pre-miRNA
AAGGTCACAATCAACATTCATTGCTGTCGGTGGGTTTAACTATGTGGACAAGCTCACTGAACAATGAATGCAACTGTGGCCCC

dot-bracket secondary structure
..(((((((.....(((((((((...(((((((((((..((....))..))))))))))).)))))))))....)))))))..


SIMILARITIES
miRBase gga-mir-181b-1: 6e-42

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-181: 0.0000000003
most similar mature miRNAs

Identical with: gga-mir-181b-1 from miRBase (MNEST025976)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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