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Species belonging to selected taxon:

Gasterosteus aculeatus



ABOUT THIS RECORD

ID: MNEST007258
species: Gasterosteus aculeatus
miRNA family: miR-1279
source: miRNEST

Taxonomy by NCBI:
Gasterosteus aculeatus Gasterosteus Gasterosteidae Gasterosteiformes Gasterosteiformes/Syngnathiformes group Smegmamorpha Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATATTGCTTCTTGGTGCAG

miRNA*
TCATTAAGGGGTTTTGTGACT

mismatches: 5
bulges: 0

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pre-miRNA
AACTTATTTTTTCATATTGCTTCTTGGTGCAGTTAATTTTTTTATCTATACTTCAATCATTAAGGGGTTTTGTGACTTGATTTAG

dot-bracket secondary structure
...........(((((..(((((((((((............................)))))))))))..)))))..........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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