miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Peromyscus maniculatus bairdii, Oryctolagus cuniculus, Cavia porcellus, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST009770
species: Peromyscus polionotus subgriseus
miRNA family: miR-3473
source: miRNEST

Taxonomy by NCBI:
Peromyscus polionotus subgriseus Peromyscus polionotus Peromyscus Neotominae Cricetidae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAGAGATGGCTCAGGGGTT

miRNA*
GTCCTGAGTTCAATTCCTAGC

mismatches: 2
bulges: 2

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pre-miRNA
GGCTGGAGAGATGGCTCAGGGGTTAAGAACAGTGGCTGCTTTTCCAGAGGTCCTGAGTTCAATTCCTAGC

dot-bracket secondary structure
.(((((.(((.((((((((((.((..(((.(((....))).)))...)).))))))).))).))))))))


SIMILARITIES
miRBase mmu-mir-3473b: 0.0008

PMRD no hits

microPC no hits
UniProt no hits

RFAM tRNA: 3e-16
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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