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Species belonging to selected taxon:
Gossypium arboreum
,
Gossypium hirsutum
,
Gossypium raimondii
ABOUT THIS RECORD
ID:
MNEST048633
species:
Gossypium raimondii
miRNA family:
MIR157
source:
PMRD, original name:
gra-miR157d
Taxonomy by NCBI:
Gossypium raimondii
Gossypium
Malvoideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGACAGAAGAGAGAGAGCAC
miRNA*
GTTCGGAGTTGATCATGTCATTT
mismatches:
8
bulges:
2
View larger
pre-miRNA
AA
GTTCGGAGTTGATCATGTCATTT
AACCCAAGAGTCAATCCCTGATTTCTGGAGCCCCATGGTTGAT
TTGACAGAAGAGAGAGAGCAC
dot-bracket secondary structure
..
((((....((..((.(((((.((
((((...((((((.....)))))).(((....))).)))))).
.)))))))..))...))))..
SIMILARITIES
miRBase
far-MIR156b
:
0.0000003
PMRD
zma-miR157m
:
0.0000003
microPC
miR157
:
0.00007
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
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