miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Amphimedon queenslandica



ABOUT THIS RECORD

ID: MNEST009055
species: Amphimedon queenslandica
miRNA family: miR-669n
source: miRNEST

Taxonomy by NCBI:
Amphimedon queenslandica Amphimedon Niphatidae Haplosclerida Ceractinomorpha Demospongiae Porifera Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATTTGTGTGTGTGTGTGTGTG

miRNA*
TCACCTCACACACACACAATGAT

mismatches: 4
bulges: 1

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pre-miRNA
TAGGACTTGATTGCTTTCTATCTCACCTCACACACACACAATGATGCCGAGACTTAAAGCTGGTTCTGGGACCGTCTCGTTGTGATTTGTGTGTGTGTGT
GTGTG
TGTCATGCAATTAAGATTT


dot-bracket secondary structure
.....(((((((((....(((..(((..(((((((((((((..(((.((((((........((((....)))))))))).)))...))))))))))))).
))).)
))....)))))))))....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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