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Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST046709
species: Helianthus argophyllus
miRNA family: MIR156
source: microPC, original name: miR156

Taxonomy by NCBI:
Helianthus argophyllus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCAC

miRNA*
GCTCACTTCTCTTTCTGTCA

mismatches: 1
bulges: 2

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pre-miRNA
TGACAGAAGAGAGTGAGCACTCGCCGGCAACCGTATATAGAGATTATACTCTTGTTGGAATTATGCGTGTGCTCACTTCTCTTTCTGTCA

dot-bracket secondary structure
.(((((((((((((((((((.(((((((((..(((((.......)))))..)))))).......))).)))))))).)))).))))))).


SIMILARITIES
miRBase osa-MIR156l: 0.000004

PMRD stu-miR156a: 0.000004

microPC miR156: 7e-45
UniProt no hits

RFAM mir-156: 0.00008

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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