miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Helianthus argophyllus
,
Helianthus ciliaris
,
Helianthus exilis
,
Helianthus paradoxus
,
Helianthus petiolaris
,
Helianthus tuberosus
,
Parthenium argentatum
,
Zinnia violacea
,
Helianthus annuus
ABOUT THIS RECORD
ID:
MNEST002848
species:
Zinnia violacea
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Zinnia violacea
Zinnia
Heliantheae
Heliantheae alliance
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCATCA
miRNA*
ATTTTGAAATGTTGAGAGG
mismatches:
4
bulges:
2
View larger
pre-miRNA
TGACAAGAATCTG
ATTTTGAAATGTTGAGAGG
CGACAAAAGGCTGTTCTTTATTAGTA
TCATCATCATCATCATCATCA
TCATCATCAT
dot-bracket secondary structure
...........((
((..(((.(((.(((((.(
(....(((((....)))))....)).
)).))).)))..)))..))))
..........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record