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Species belonging to selected taxon:
Acyrthosiphon pisum
,
Aphis gossypii
,
Nilaparvata lugens
,
Myzus persicae
,
Peregrinus maidis
,
Rhodnius prolixus
ABOUT THIS RECORD
ID:
MNEST009589
species:
Peregrinus maidis
miRNA family:
mir-4077
source:
miRNEST
Taxonomy by NCBI:
Peregrinus maidis
Peregrinus
Delphacinae
Delphacidae
Fulgoroidea
Archaeorrhyncha
Neohemiptera
Euhemiptera
Hemiptera
Paraneoptera
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAGTTGGTATTTGAATGACTA
miRNA*
GTTTTCAAATTTGAACTTTG
mismatches:
3
bulges:
1
View larger
pre-miRNA
TAAGGGGGGGTG
GTTTTCAAATTTGAACTTTG
AAGCATTTATAGAACTTTCAAAATTTTTGTCAGGAAAAGTTGAGCGAAAAGGTTTTCGAACTTTTCAT
ATCTATTTTTAAAATATAGATGGTA
AAGTTGGTATTTGAATGACTA
TTTTTATTA
dot-bracket secondary structure
.....(((((((
((((((((((...(((((((
...((((((((....(((.(((((.........((((((((...(((((....)))))))))))))..
....))))).))).)))))))).))
)))))...))))))).)))))
)))))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record