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Species belonging to selected taxon:

Heterodera glycines, Globodera rostochiensis



ABOUT THIS RECORD

ID: MNEST009821
species: Globodera rostochiensis
miRNA family: mir-1322
source: miRNEST

Taxonomy by NCBI:
Globodera rostochiensis Globodera Heteroderinae Heteroderidae Tylenchoidea Tylenchina Tylenchida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGTGATGTTGCTGATGCTGGT

miRNA*
CTTGGCGTTATGACATTGCTGA

mismatches: 1
bulges: 1

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pre-miRNA
TTCGACTTGGCGTTATGACATTGCTGAGTTTGTCGGTGATGTTGCTGATGCTGGTGG

dot-bracket secondary structure
.(((...((((((((((((((((((((.....)))))))))))).)))))))).)))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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