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Species belonging to selected taxon:

Homo sapiens, Pongo abelii, Pan troglodytes verus



ABOUT THIS RECORD

ID: MNEST028662
species: Homo sapiens
miRNA family: mir-451
source: miRBase, original name: hsa-mir-451b (MI0017360)

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAGCAAGAGAACCATTACCATT

miRNA*
TGGTAACGGTTTCCTTGCCATT

mismatches: 4
bulges: 0

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pre-miRNA
TGGGTATAGCAAGAGAACCATTACCATTACTAAACTCAGTAATGGTAACGGTTTCCTTGCCATTCCCA

dot-bracket secondary structure
.(((.((.(((((..((((.(((((((((((......))))))))))).))))..))))).)).))).


SIMILARITIES
miRBase hsa-mir-451: 4e-33

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-451: 1e-18

Identical with: hsa-mir-451 from miRBase (MNEST028661)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa

references

[1] Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C, Cancer Res. 71:78-86(2011)., "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene"




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