miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Homo sapiens, Pongo abelii, Pan troglodytes verus



ABOUT THIS RECORD

ID: MNEST007839
species: Homo sapiens
miRNA family: mir-548
source: miRNEST

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTTGGTGCAAAAGTAATTGCT

miRNA*
CAATTACCTTTGCACCGATGC

mismatches: 3
bulges: 0

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pre-miRNA
ATACTTTTATACATATATGAGGTTGGTGCAAAAGTAATTGCTCTCTTTGCCATTGAAAGTAATGGCAAAAATCACAATTACCTTTGCACCGATGCAATAT
ATGAGGACTGTAT


dot-bracket secondary structure
((((..((...(((((((...(((((((((((.(((((((.....((((((((((....)))))))))).....))))))).)))))))))))...))))
)))..))..))))



SIMILARITIES
miRBase hsa-mir-548a-3: 0.000000000000002

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-548: 5e-19
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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