miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Oscarella carmela



ABOUT THIS RECORD

ID: MNEST009850
species: Oscarella carmela
miRNA family: mir-598
source: miRNEST

Taxonomy by NCBI:
Oscarella carmela Oscarella Plakinidae Homosclerophorida Homoscleromorpha Demospongiae Porifera Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACGTCGTCGTCGTCGTCGTC

miRNA*
CGGCGGAACGACGTCAGTAAA

mismatches: 3
bulges: 2

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pre-miRNA
AAGCAAAGGCGACGGCGGAACGACGTCAGTAAAAAACGGTGGGCGCAAAATGACACGATATTCTCACAGTGGGCGCGATCGTGATCGGCATGCTTGGGCG
CCGTCTTGCGGGGCGTGTCCCGGGTCTGGCCGCACGTGCACCAAGAGAAGAGCCGGTTCTACGTCGTCGTCGTCGTCGTCGTCGTCGTC


dot-bracket secondary structure
.......(((((((((((.((((((...(((.((..((((....................(((((....(((..((...((((...(((..(((((((((
(.((((....))))))).)))))))...))).)))).)).))).)))))..)))).)).)))..))))))..)))))))))))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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