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Species belonging to selected taxon:
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
ABOUT THIS RECORD
ID:
MNEST046412
species:
Hordeum vulgare
miRNA family:
MIR444
source:
microPC, original name:
miR444
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCAGTTGTTGCCTCATGCTT
miRNA*
GCTTGAGACAGCAACTGCACA
mismatches:
2
bulges:
0
View larger
pre-miRNA
AA
GCTTGAGACAGCAACTGCACA
ACTTGCAAGAAAGTCACGATTATGAAGACCCATAGATTTTGTAACTTCCTTGAAAGTAA
TGCAGTTGTTGCCTCATG
CTT
dot-bracket secondary structure
((
((.((((.(((((((((((..
((((.((((.((((.(((((((((......)))))...)))).)))).)))).))))..
))))))))))).)))).)
)))
SIMILARITIES
miRBase
hvu-MIR444b
:
9e-54
PMRD
tae-miR2024a
:
3e-44
microPC
miR444
:
3e-44
UniProt
no hits
RFAM
MIR444: 0.000000001
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
degradome data
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