miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Petromyzon marinus



ABOUT THIS RECORD

ID: MNEST008688
species: Petromyzon marinus
miRNA family: miR-2445
source: miRNEST

Taxonomy by NCBI:
Petromyzon marinus Petromyzon Petromyzontidae Petromyzontiformes Hyperoartia Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCCTTTTCTCTTTTTTGTTTT

miRNA*
TTAAGGAAAGGCAAAAGGCAG

mismatches: 4
bulges: 0

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pre-miRNA
AGGCGGCCTTTTCTCTTTTTTGTTTTTGTCCAACCTGCGAATTTTGGAAGGGACCTTGTTTCCCCGCACCCCCTCCACCCCGTGGAGCAATGCATGCAAT
CCACTAACTTTTATTCACTTCCATGGAACGCCCGTTATGAATATTGTGAATATGGGCGTTTCTTTAACCTGAGAAATGTAGTTTCGCACAGATTAAGGAA
AGGCAAAAGGCAG
TA


dot-bracket secondary structure
..((.(((((((.((((((((...(((((.......(((((...((((.(((....(((......))).))).))))....((((((((.....)))..)
))))..(((.((.((((.......(((((((((.((((((...))))))....))))))))).......)))).))...)))))))))))))...)))))
))).))))))).)
).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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