miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Ixodes scapularis, Rhipicephalus microplus, Rhipicephalus appendiculatus



ABOUT THIS RECORD

ID: MNEST007501
species: Ixodes scapularis
miRNA family: miR-4266
source: miRNEST

Taxonomy by NCBI:
Ixodes scapularis Ixodes Ixodinae Ixodidae Ixodoidea Ixodida Parasitiformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTAGGAGGCCTTGGGTTTCTC

miRNA*
GAAATCAGGGCCTCCACAGC

mismatches: 4
bulges: 1

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pre-miRNA
CCGACGGGGAGCTAGGAGGCCTTGGGTTTCTCGTAGATGCGCTGCAACAGCGCCCTCAAGATGCTGCCAGGGACCTCTTGGTGCGTGGAAATCAGGGCCT
CCACAGC
AGACGCAG


dot-bracket secondary structure
((.....)).....(((((((((((.(((((....((.((((((...))))))..))...((((.(((((((...)))))))))))))))))))))))))
))...((
....))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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