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Species belonging to selected taxon:
Antirrhinum majus
,
Fraxinus excelsior
,
Mimulus guttatus
,
Mimulus guttatus var. nasutus
,
Mimulus lewisii
,
Ocimum basilicum
,
Salvia miltiorrhiza
,
Striga hermonthica
,
Triphysaria pusilla
,
Triphysaria versicolor
ABOUT THIS RECORD
ID:
MNEST002769
species:
Triphysaria pusilla
miRNA family:
MIR1122
source:
miRNEST
Taxonomy by NCBI:
Triphysaria pusilla
Triphysaria
Rhinantheae
Orobanchaceae
Lamiales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCGTACCAAAATG
miRNA*
TTTTGGGTCGGAGGGAGTATG
mismatches:
2
bulges:
0
View larger
pre-miRNA
CCAAATTTTG
TACTCCCTCCGTACCAAAATG
ATTGCAATCA
TTTTGGGTCGGAGGGAGTATG
TTTGATC
dot-bracket secondary structure
.(((((...(
(((((((((((..((((((((
((....))))
))))))..)))))))))))))
))))...
SIMILARITIES
miRBase
tae-MIR1137
:
0.0002
PMRD
tmo-miR1122
:
0.00005
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record