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Species belonging to selected taxon:
Sus scrofa
,
Bos taurus
,
Canis lupus familiaris
,
Ovis aries
,
Ursus americanus
,
Equus caballus
,
Bos indicus
,
Bos sp.
,
Capra hircus
ABOUT THIS RECORD
ID:
MNEST033348
species:
Bos taurus
miRNA family:
mir-368
source:
miRBase, original name:
bta-mir-376a
(
MI0010457
)
Taxonomy by NCBI:
Bos taurus
Bos
Bovinae
Bovidae
Pecora
Ruminantia
Cetartiodactyla
Laurasiatheria
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATCATAGAGGAAAATCCACGT
miRNA*
GTAGATTCTCCTTCTATGAGTA
mismatches:
4
bulges:
1
View larger
pre-miRNA
AATCCTTCTTTGGTATTTAAAAG
GTAGATTCTCCTTCTATGAGTA
CATTATTTACGATTA
ATCATAGAGGAAAATCCACGT
TTTCAGTATCAAATGCTG
dot-bracket secondary structure
........(((((((((.((((.
((.((((.((((.((((((...
.(((......)))..
.)))))))))).)))).)).)
))).))))))))).....
SIMILARITIES
miRBase
oar-mir-376a
:
3e-50
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-154: 2e-36
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Strozzi F, Mazza R, Malinverni R, Williams JL,
Anim Genet. 40:125(2009).
,
"Annotation of 390 bovine miRNA genes by sequence similarity with other species"