miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Sus scrofa, Bos taurus, Canis lupus familiaris, Ovis aries, Ursus americanus, Equus caballus, Bos indicus, Bos sp., Capra hircus



ABOUT THIS RECORD

ID: MNEST009262
species: Equus caballus
miRNA family: miR-223
source: miRNEST

Taxonomy by NCBI:
Equus caballus Equus subg. Equus Equus Equidae Perissodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CGGGTATTTGACAAGCTGAGT

miRNA*
 TCAGTTTGTCAAATACCCCAA

mismatches: 5
bulges: 0
View larger
pre-miRNA
 GCCTCCTGCAGTGCCACGCTCCGGGTATTTGACAAGCTGAGTTGGACACTCCATGTGGTAGAGTGTCAGTTTGTCAAATACCCCAAGTGCGGCACATGCC
TAAC

dot-bracket secondary structure
.......((((((((.((((..((((((((((((((((......(((((((.((...)).)))))))))))))))))))))))..)))).))))).))).
....


SIMILARITIES
miRBase eca-mir-223: 5e-49

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-223: 6e-43		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;