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Species belonging to selected taxon:
Sus scrofa
,
Bos taurus
,
Canis lupus familiaris
,
Ovis aries
,
Ursus americanus
,
Equus caballus
,
Bos indicus
,
Bos sp.
,
Capra hircus
ABOUT THIS RECORD
ID:
MNEST005234
species:
Sus scrofa
miRNA family:
miR-669n
source:
miRNEST
Taxonomy by NCBI:
Sus scrofa
Sus
Suidae
Suina
Cetartiodactyla
Laurasiatheria
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGTGTGTGTATGTGTGTG
miRNA*
ACTGTGCCACACGGGAAC
mismatches:
1
bulges:
2
View larger
pre-miRNA
TTAAGGTGAAGGGAAATGGGT
TTTTGTGTGTGTATGTGTGTG
GTTTTGTCTGGCCACTCCACAGTTGTGGGCTGTGCCATAGCTGTGGCAATGCCGGATC
CTTAACCC
ACTGTGCCACACGGGAAC
TTCCAGAGAAATGTTTTA
dot-bracket secondary structure
...........(((....(((
(((((((((.(((((.(((.(
(((..(((((((....((((((((((((......))))))))))))....))))))).
...)))))
))))))))))))))))))
)))).((((....)))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record