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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST041873
species: Festuca arundinacea
miRNA family: MIR169
source: miRBase, original name: far-MIR169 (MI0016612)

Taxonomy by NCBI:
Festuca arundinacea Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGCCAAGGATGACTTGCCTA

miRNA*
 GGCAGTCACCTTGGCTAGC

mismatches: 0
bulges: 2
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pre-miRNA
 GGCACGAGGGCAAAGCCTTACATGGCTGCAAGGGCCTTACCTCTGATAGCCAAGGATGACTTGCCTATGTCTTCTTCCTCCCTCAGATGCCTAATTAGCC
TTGGAGGTGTGGGGTCTCATGGGCAGTCACCTTGGCTAGCCTGAGTGGCT

dot-bracket secondary structure
(.(((..((((..((((......)))).((..((.....))..)).(((((((((.(((((.(((((((.((((..(((((....((.((.......)).
)))))))...))))...)))))))))))))))))))))))))..))).).


SIMILARITIES
miRBase bdi-MIR169g: 9e-18

PMRD zma-miR169d: 0.000000000002

microPC miR169: 5e-47		UniProt no hits

RFAM MIR169_5: 0.0000000006

Identical with: miR169 from microPC (MNEST045660)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references
[1] Unver T, Bakar M, Shearman RC, Budak H, Mol Genet Genomics. 283:397-413(2010)., "Genome-wide profiling and analysis of Festuca arundinacea miRNAs and transcriptomes in response to foliar glyphosate application"



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