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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST000666
species: Festuca arundinacea
miRNA family: MIR1122
source: miRNEST

Taxonomy by NCBI:
Festuca arundinacea Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGATACATCTGTATCTAGAC

miRNA*
 CTAGATACGAATGTACCTAGA

mismatches: 3
bulges: 0
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pre-miRNA
 TCTAGTACTCCCTCCGATCCAAATTAATTGACTCCATTTTATCTAGATACGAATGTACCTAGATGCGTTTGTTGACTAGATACATCTGTATCTAGACAAA
GTGGAGTCAATTAATTTGAATCGGAGGGAGTAGTAT

dot-bracket secondary structure
.....(((((((((((((.(((((((((((((((((((((.((((((((((.(((((.((((..((....))...)))).))))).)))))))))).)))
)))))))))))))))))).)))))))))))))....


SIMILARITIES
miRBase far-MIR1122: 0.0004

PMRD hpi-miR1122: 0.0004

microPC miR1122: 5e-25		UniProt no hits

RFAM MIR1122: 0.0000005		most similar mature miRNAs

Identical with: miR1122 from microPC (MNEST045186)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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