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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST045585
species: Saccharum officinarum
source: microPC, original name: miR169

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGCCAAGGATGACTTGCC

miRNA*
 CAGGTTCTTCTCTTTGGCT

mismatches: 1
bulges: 3
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pre-miRNA
 AGCCAAGGATGACTTGCCGGCCGATGCCTCGATCGATCCCTCATCCCCGTCCGGCCGGGAACGTCGCACGTATGTATGTATGCGTGCATATGCTGCGAAC
TGTGAGGCATCCATATCGACCGGCAGGTTCTTCTCTTTGGCT

dot-bracket secondary structure
(((((((((.((((((((((.((((((((((..............((((......))))....(((((((((((((((....)))))))))).)))))..
..)))))))......))).))))))))))....)))))))))


SIMILARITIES
miRBase ssp-MIR169: 4e-72

PMRD sof-miR169: 3e-60

microPC miR169: 7e-77		UniProt no hits

RFAM MIR169_2: 0.0000001

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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