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Species belonging to selected taxon:
Litopenaeus vannamei
ABOUT THIS RECORD
ID:
MNEST007610
species:
Litopenaeus vannamei
miRNA family:
mir-1306
source:
miRNEST
Taxonomy by NCBI:
Litopenaeus vannamei
Litopenaeus
Penaeidae
Penaeoidea
Dendrobranchiata
Decapoda
Eucarida
Eumalacostraca
Malacostraca
Crustacea
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACGTTGGCTCTGGTGTAGGAA
miRNA*
CACCTGCTGCTGAAGCCAAGAAGG
mismatches:
5
bulges:
1
View larger
pre-miRNA
TTGCCA
ACGTTGGCTCTGGTGTAGGAA
CTGGTGGTGGTGGCGGTGGTGCTGCCCCTGCAGCTGCTGCAGCTGCCAGTG
CACCTGCTGCTGAAGCCAAGAA
GG
AAG
dot-bracket secondary structure
......
...((((((.(((((((((.(
((((((((....(((((...(((((....))))).))))).))))))))).
..))))).)))).))))))...
..
...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record