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Species belonging to selected taxon:
Locusta migratoria
ABOUT THIS RECORD
ID:
MNEST009169
species:
Locusta migratoria
miRNA family:
mir-580
source:
miRNEST
Taxonomy by NCBI:
Locusta migratoria
Locusta
Oedipodinae
Acrididae
Acridoidea
Acridomorpha
Caelifera
Orthoptera
Orthopteroidea
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGAGAATGATGCATCATTGG
miRNA*
CATGACGACATGATTTACAAAA
mismatches:
5
bulges:
1
View larger
pre-miRNA
TATCGCGTCCAGCGGAAGAAT
TTGAGAATGATGCATCATTGG
AAGCGATGTGGGCTGTTAAGGCCTATGAACATGCAGAAGTATATTTCAATATTTTATG
TTCAGTAGATCCAAAGCTTTTGAGACTGACACCC
CATGACGACATGATTTACAAAA
TTTTCCGTGAAGAATTTC
dot-bracket secondary structure
..((...((..((((((((.(
(((.((((.(((..((((.((
..(((.((((((((.....))))))))....))).(((((((......))))))).((
(.((((...((.((....)).)).))))))).))
.))))...))).)))).)))).
)))))))))).)).....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q9D0B6|CX026_MOUSE: 0.00000000003
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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