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Species belonging to selected taxon:
Festuca arundinacea
,
Festuca pratensis
,
Lolium perenne
ABOUT THIS RECORD
ID:
MNEST046756
species:
Festuca arundinacea
source:
microPC, original name:
miR160
Taxonomy by NCBI:
Festuca arundinacea
Festuca
Loliinae
Poeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCCTGGCTCCCTGTATGCC
miRNA*
CGTGCAAGGTGCCAAGC
mismatches:
3
bulges:
0
View larger
pre-miRNA
GCCTGGCTCCCTGTATGCC
ACACATGTAGCCCAACCCAAGAATGTGGTTGCCTGCTGTGGGTGG
CGTGCAAGGTGCCAAGC
dot-bracket secondary structure
((.((((.((.((((((((
((.(((((((..(((((((....)).))))).)))).))).))))
)))))).)).)))).))
SIMILARITIES
miRBase
bdi-MIR160c
:
2e-29
PMRD
sbi-miR160a
:
3e-22
microPC
miR160
:
9e-41
UniProt
no hits
RFAM
mir-160: 5e-21
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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