miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Lolium perenne



ABOUT THIS RECORD

ID: MNEST001417
species: Lolium perenne
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Lolium perenne Lolium Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACTCCCTCCGTCCTATAATAA

miRNA*
ATTATACGAATGGATGGAGTAA

mismatches: 4
bulges: 1

View larger
pre-miRNA
TATTATTATGTACTCCCTCCGTCCTATAATAATAGCTGTATGATAATATTATAATTGAGATGTTATTAGAACCCGCTACTCCATTATAATATTGCGTATT
GATTGTAATAGCCACCTATTATACGAATGGATGGAGTAAAATATCCC


dot-bracket secondary structure
......(((.((((((.(((.((.(((((((...((((((((.((((((((((((.(((..((...........))..))).))))))))))))..))).
.......)))))....))))))).))..))).))))))..)))....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC miR1436: 0.0004
UniProt no hits

RFAM MIR1122: 0.0005
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;