miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Lotus japonicus
ABOUT THIS RECORD
ID:
MNEST048675
species:
Lotus japonicus
miRNA family:
MIR157
source:
PMRD, original name:
lja-miR157a
Taxonomy by NCBI:
Lotus japonicus
Lotus
Loteae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGACAGAAGATAGAGAGCAC
miRNA*
GCCGTCTGAAGA
mismatches:
14
bulges:
0
View larger
pre-miRNA
TTGACAGAAGATAGAGAGCAC
AACCTGAGTCGAAAGATCCAGGTTT
GCCGTCTGAAGA
dot-bracket secondary structure
...........((((..(((.
((((((..((....))..)))))))
))..))))....
SIMILARITIES
miRBase
gma-MIR156c
:
0.00000000001
PMRD
gma-miR156c
:
0.00000000001
microPC
miR157
:
0.00001
UniProt
no hits
RFAM
mir-156: 0.0007
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record