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Species belonging to selected taxon:
Macaca fascicularis
,
Macaca nemestrina
,
Macaca mulatta
ABOUT THIS RECORD
ID:
MNEST027998
species:
Macaca mulatta
miRNA family:
mir-548
source:
miRBase, original name:
mml-mir-548c
(
MI0007821
)
Taxonomy by NCBI:
Macaca mulatta
Macaca
Cercopithecinae
Cercopithecidae
Cercopithecoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAAAACCGGCAATTACTTCTGC
miRNA*
AAAAGTAATTGGGGTTTTTTGTC
mismatches:
2
bulges:
3
View larger
pre-miRNA
TGTGATGTATTAGGTTGATGC
AAAAGTAATTGGGGTTTTTTGTC
ATTAAAAGTAGTGA
CAAAACCGGCAATTACTTCTGC
ACCAAACTAATATAA
dot-bracket secondary structure
.....((((((((.(((.(((
(.(((((((((.(((((..((((
((((....))))))
)))))))..))))))))).)))
).))).)))))))).
SIMILARITIES
miRBase
ptr-mir-548a-2
:
2e-29
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-548: 0.000000000000001
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Yue J, Sheng Y, Orwig KE,
BMC Genomics. 9:8(2008).
,
"Identification of novel homologous microRNA genes in the rhesus macaque genome"