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Species belonging to selected taxon:
Euphorbia esula
,
Hevea brasiliensis
,
Jatropha curcas
,
Linum usitatissimum
,
Manihot esculenta
,
Populus deltoides
,
Populus euphratica
,
Populus nigra
,
Populus tremula
,
Populus tremula x Populus alba
,
Populus tremula x Populus tremuloides
,
Populus tremuloides
,
Populus trichocarpa x Populus nigra
,
Populus x canadensis
,
Bruguiera gymnorhiza
,
Populus trichocarpa
,
Ricinus communis
,
Populus trichocarpa x Populus deltoides
ABOUT THIS RECORD
ID:
MNEST046778
species:
Euphorbia esula
source:
microPC, original name:
miR171
Taxonomy by NCBI:
Euphorbia esula
Euphorbia
Euphorbieae
Euphorbioideae
Euphorbiaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGAGCCGTGCCAATATCA
miRNA*
ATATTGGTGCGGTTCAATC
mismatches:
3
bulges:
0
View larger
pre-miRNA
G
ATATTGGTGCGGTTCAATC
GGAGAACTTTGCTCTTTGTTTAGAGAGCTATGTTGTTTGA
TTGAGCCGTGCCAATATCA
dot-bracket secondary structure
(
(((((((..((((((((((
(((.(((...((((((......))))))...))).)))))
))))))))..)))))))).
SIMILARITIES
miRBase
rco-MIR171b
:
0.0000000000002
PMRD
vvi-miR171d
:
0.0000000009
microPC
miR171
:
1e-39
UniProt
no hits
RFAM
MIR171_1: 0.000000000004
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record