miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii, Theobroma cacao



ABOUT THIS RECORD

ID: MNEST000806
species: Gossypium raimondii
miRNA family: MIRf519
source: miRNEST

Taxonomy by NCBI:
Gossypium raimondii Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTATAGCATCATGAGCAATCA

miRNA*
ACTGCTCATGATGTTATATCA

mismatches: 2
bulges: 0

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pre-miRNA
AGAAAGATCTTGTATAGCATCATGAGCAATCAGCCTTGCAACTTTTTTTTTTTAATTAAAAAAAATTCGAAAAGTGACTGCTCATGATGTTATATCATTT
TTCAT


dot-bracket secondary structure
.(((((((...(((((((((((((((((.((.((...)).(((((((((((((......))))))...))))))))).))))))))))))))))).))))
)))..



SIMILARITIES
miRBase no hits

PMRD ath-miRf11142-akr: 0.000000001

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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