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Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii, Theobroma cacao



ABOUT THIS RECORD

ID: MNEST000789
species: Gossypium hirsutum
miRNA family: miR2930
source: miRNEST

Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCTCTTCTTTCGCGCGTGCG

miRNA*
CTCCGATTGAGAGATAAGAACA

mismatches: 5
bulges: 1

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pre-miRNA
TTGTTTACCTTTTCTCTTCTTTCGCGCGTGCGGTGGTGCTCCCCCTCTTACTGTACCACGCTCCGATTGAGAGATAAGAACACCTCTTTC

dot-bracket secondary structure
...........((((..(((((((..((.(((.((((((.............)))))))))..))..)))))))..))))..........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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