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Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii



ABOUT THIS RECORD

ID: MNEST000819
species: Gossypium raimondii
miRNA family: MIRf422
source: miRNEST

Taxonomy by NCBI:
Gossypium raimondii Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACCTTGGAAGGTTCATTATAT

miRNA*
TTGAGAAGCCTTCCGAGAATA

mismatches: 5
bulges: 0

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pre-miRNA
TGAAACTCGCTCCTGGAGGACACCTTGGAAGGTTCATTATATGGACCAAATCGGCTTACGAGAAGCTGGATTCGATTTATGGGTCATTTGAGAAGCCTTC
CGAGAATA
AGAAACGGTACATCTTGC


dot-bracket secondary structure
..........(((....)))...(((((((((((..(((.((((.((((.(((((((.....))))))).)........))).)))).)))..)))))))
))))..((
(((.........))))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|P49691|RL4B_ARATH: 0.000000000000005

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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