ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-103
source: miRBase, original name: hsa-mir-103b-1 (MI0007261)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATAGCCCTGTACAATGCTGCT miRNA* CAGCACTGTAAAGAAGCCGA mismatches: 8 bulges: 1 |
pre-miRNA
TCATAGCCCTGTACAATGCTGCTTGATCCATATGCAACAAGGCAGCACTGTAAAGAAGCCGA
dot-bracket secondary structure
.....((.((.((((.((((((((...............)))))))).)))).))..))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
evidence: ChIP-seq
references
[1] Azuma-Mukai A, Oguri H, Mituyama T, Qian ZR, Asai K, Siomi H, Siomi MC, Proc Natl Acad Sci U S A. 105:7964-7969(2008)., "Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing"
TCATAGCCCTGTACAATGCTGCTTGATCCATATGCAACAAGGCAGCACTGTAAAGAAGCCGA
dot-bracket secondary structure
.....((.((.((((.((((((((...............)))))))).)))).))..))...
SIMILARITIES| miRBase gga-mir-103-1: 1e-29 PMRD no hits microPC no hits | UniProt no hits RFAM mir-103: 3e-28 |
Identical with: rno-mir-103-1 from miRBase (MNEST032711) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
evidence: ChIP-seq
references
[1] Azuma-Mukai A, Oguri H, Mituyama T, Qian ZR, Asai K, Siomi H, Siomi MC, Proc Natl Acad Sci U S A. 105:7964-7969(2008)., "Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing"
