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Species belonging to selected taxon:

Manihot esculenta



ABOUT THIS RECORD

ID: MNEST045748
species: Manihot esculenta
source: microPC, original name: miR166

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CGGACCAGGCTTCATTCCC

miRNA*
GAATGTTGTCTGGCTCGAG

mismatches: 4
bulges: 0

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pre-miRNA
GGGAATGTTGTCTGGCTCGAGGACTCTCTTTTGATGCTTTTACATACAGATCTAAGCATATTGATCAACTGCTAGTGTCGTCGGACCAGGCTTCATTCCC


dot-bracket secondary structure
(((((((..((((((..(((.(((.(((..(((((((((..............)))))......))))..)..)).))).)))..))))))..)))))))



SIMILARITIES
miRBase rco-MIR166e: 0.0000000000003

PMRD ghr-miR166b: 0.000000001

microPC miR166: 5e-52
UniProt no hits

RFAM mir-166: 0.000000000006

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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