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Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST001541
species: Medicago sativa
miRNA family: MIR393
source: miRNEST

Taxonomy by NCBI:
Medicago sativa Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCCAAAGGGATCGCATTGTTT

miRNA*
GCTTGCGAATCCTTTTGCATC

mismatches: 3
bulges: 2

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pre-miRNA
GCACGACGACATCCAAAGGGATCGCATTGTTTCATACTTCCCTATGTCTGTTAGAAGCGCCGTGTCTCCGAATGGACAGTCTCTAATCTCAAGCTTGCGA
ATCCTTTTGCATC
CGTTCAAT


dot-bracket secondary structure
....((((..((.(((((((((((((..((((............((((((((.((.((.....)).))..))))))))............)))).)))).
))))))))).)).
))))....



SIMILARITIES
miRBase sbi-MIR393: 0.0004

PMRD vvi-miR393b: 0.0004

microPC no hits
UniProt sp|Q9LW29|AFB2_ARATH: 0.00000000000004

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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