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Species belonging to selected taxon:
Medicago sativa
,
Medicago truncatula
ABOUT THIS RECORD
ID:
MNEST008389
species:
Medicago truncatula
miRNA family:
MIR1439
source:
miRNEST
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATTTGGGACGGAGGGAGTATA
miRNA*
TACTCCCTCCGTCCCAAATTG
mismatches:
0
bulges:
0
View larger
pre-miRNA
CNNATTGTA
TACTCCCTCCGTCCCAAATTG
TATGTCACTTAGGAAAAAATATTTGTCCCAAATTGTATGTTGCTTTACAATACCAATGAAAAATTAATGT
TACTTTTCCTATTATATCCTTAACTATTTATTACTCTCTCTTCTTTCAATTCCTTCATTTATCTTTTTCATATCATTTATTGAGGACAATTTTGTAAAAC
AACTCATAATATCTCTTTCCCACACAATATTAATTACATTTCTTAATATGTGTGAAATGCCCAAAACGTCATACA
ATTTGGGACGGAGGGAGTATA
ACAT
TG
dot-bracket secondary structure
.......((
(((((((((((((((((((((
((((.((.((.(((((..(((((..........((...((((.(((((((..((.((((((((..((((.
.......................................................))))....)))))))).(((.....)))))......))))))).)
))).)).)))))...)))))((((((.((((((.........)))))))))))))).))..........))))))
)))))))))))))))))))))
....
..
SIMILARITIES
miRBase
tae-MIR1122
:
0.0002
PMRD
osa-miRf10322-akr
:
0.00006
microPC
no hits
UniProt
no hits
RFAM
MIR806: 0.0003
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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