miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Trichosurus vulpecula, Macropus eugenii



ABOUT THIS RECORD

ID: MNEST007698
species: Trichosurus vulpecula
miRNA family: mir-1898
source: miRNEST

Taxonomy by NCBI:
Trichosurus vulpecula Trichosurus Phalangeridae Diprotodontia Metatheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGGTCAAAGTTCACAGGGGAT

miRNA*
AATCTGTGCACTCTGACTTAA

mismatches: 4
bulges: 0

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pre-miRNA
TAAATGAACATAGGTCAAAGTTCACAGGGGATCAAGAAATATTATTCTTGTATAATCTGTGCACTCTGACTTAAAGTACATA

dot-bracket secondary structure
...(((.((.(((((((.(((.((((((..((((((((......)))))).))..)))))).))).)))))))..)).))).


SIMILARITIES
miRBase mmu-mir-1898: 5e-24

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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