miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aplysia californica, Lottia gigantea, Crassostrea gigas, Biomphalaria glabrata, Mytilus californianus, Euprymna scolopes, Lymnaea stagnalis



ABOUT THIS RECORD

ID: MNEST007305
species: Aplysia californica
miRNA family: miR-1814
source: miRNEST

Taxonomy by NCBI:
Aplysia californica Aplysia Aplysiidae Aplysioidea Aplysiomorpha Opisthobranchia Euthyneura Heterobranchia Apogastropoda Orthogastropoda Gastropoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGTTGGTTGGTTTTGTTTTG

miRNA*
AGCGAACACCACACACATCATA

mismatches: 3
bulges: 2

View larger
pre-miRNA
AATCAATTGTTATTTGCTTGTTGGTTGGTTGGTTTTGTTTTGTTGGGATTTTTTGGGGTTATTTTTTGACAAGCGAACACCACACACATCATATTGAGCG
ACCTCTTAAAT


dot-bracket secondary structure
.............(((((((.((((..(((((((((((((.(((((((...............)))))))))))))).)))).))..))))...))))))
)..........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;