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Species belonging to selected taxon:
Aplysia californica
,
Lottia gigantea
,
Crassostrea gigas
,
Biomphalaria glabrata
,
Mytilus californianus
,
Euprymna scolopes
,
Lymnaea stagnalis
ABOUT THIS RECORD
ID:
MNEST007323
species:
Aplysia californica
miRNA family:
miR-2981
source:
miRNEST
Taxonomy by NCBI:
Aplysia californica
Aplysia
Aplysiidae
Aplysioidea
Aplysiomorpha
Opisthobranchia
Euthyneura
Heterobranchia
Apogastropoda
Orthogastropoda
Gastropoda
Mollusca
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCGGGCGGGGCGGGCGGGAGG
miRNA*
TCTCTCGCTCTGTCCGTCT
mismatches:
0
bulges:
2
View larger
pre-miRNA
TCAAGACGTCCC
TCTCTCGCTCTGTCCGTCT
GTCTGACACTTCACACACTAACCGGCACGACGGAAGGTGTGAAAGGACAAACACGCTGACACGATAGTT
GTGGGCGGACACGCTAGCTACTGCACCAGCTTCGTCGTAGAGCGGGCGG
GCGGGCGGGGCGGGCGGGAGG
GGAGGGCCT
dot-bracket secondary structure
........((((
(((((((((((((((((((
(((((...((((((((.((..(((......))).))))))))...(((.((...((((......((((.
((.((((....)))).)).))))...)))))).)))..))..)))))))
))))))))))))))..)))))
)).......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record