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Species belonging to selected taxon:
Aplysia californica
,
Lottia gigantea
,
Crassostrea gigas
,
Biomphalaria glabrata
,
Mytilus californianus
,
Euprymna scolopes
,
Lymnaea stagnalis
ABOUT THIS RECORD
ID:
MNEST007335
species:
Aplysia californica
miRNA family:
miR-1814
source:
miRNEST
Taxonomy by NCBI:
Aplysia californica
Aplysia
Aplysiidae
Aplysioidea
Aplysiomorpha
Opisthobranchia
Euthyneura
Heterobranchia
Apogastropoda
Orthogastropoda
Gastropoda
Mollusca
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGGTTGTTTTGTTTTGTTTTT
miRNA*
AATGAAGACTGAACAACTCAT
mismatches:
3
bulges:
0
View larger
pre-miRNA
CTTTGAAATGT
GGGTTGTTTTGTTTTGTTTTT
GTGATTATGCAA
AATGAAGACTGAACAACTCAT
GCCTTTTT
dot-bracket secondary structure
.........((
(((((((((.(((((..((((
((......))))
))..))))).)))))))))))
........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record