miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus



ABOUT THIS RECORD

ID: MNEST005041
species: Mus musculus
miRNA family: miR-1369
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GAGGTGAGGAGGGAGAGGGAA

miRNA*
CCAGCTCTTTCCTCATTCTCTC

mismatches: 5
bulges: 1

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pre-miRNA
TCAGCCAGCTCTTTCCTCATTCTCTCTCACTACTAGTCCTAAAAAGGGATGCTGTGGGTGTGCAAGACAGGGTATAACACATTCCCATTTTACAGGTGTA
AAGGGGGAGGCATGAAGAGCCAGTGGTTACACACTGAGGAGGTATGGAATGGAGGTGAGGAGGGAGAGGGAATGGGACCCC


dot-bracket secondary structure
(((.((..((((((((((..(((((.((.((((..(((((.....)))))...))))..((((....(((.(((...(((..((((.((((((....)))
))).))))(((.......))).)))..)))...))).....)))).))..))))).))))))))))..))..)))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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