miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Drosophila melanogaster, Drosophila simulans, Glossina morsitans morsitans, Drosophila sechellia, Drosophila auraria, Drosophila pseudoobscura, Teleopsis dalmanni, Drosophila willistoni, Drosophila ananassae, Drosophila virilis, Drosophila erecta, Drosophila grimshawi, Ceratitis capitata, Drosophila mojavensis, Cochliomyia hominivorax, Haematobia irritans irritans, Drosophila yakuba

ABOUT THIS RECORD

ID: MNEST009324
species: Drosophila pseudoobscura
miRNA family: miR-1383
source: miRNEST

Taxonomy by NCBI:
Drosophila pseudoobscura pseudoobscura subgroup obscura group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TTGGGCCCCTTCCCCCTGGGG

miRNA*
CGAGAGGGGGAGGCGCCTTCCC

mismatches: 4
bulges: 1

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pre-miRNA
CCTCGAAATTCCCGAGAGGGGGAGGCGCCTTCCCATGGACGTGACCGTATTGGGCCCCTTCCCCCTGGGGGACAGGAAA

dot-bracket secondary structure
........(((((.((.((((((((.((((....((((......))))...)))).)))))))))).))))).......

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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