miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aedes aegypti, Culex quinquefasciatus, Anopheles gambiae, Phlebotomus papatasi, Lutzomyia longipalpis, Anopheles stephensi, Polypedilum vanderplanki



ABOUT THIS RECORD

ID: MNEST009399
species: Lutzomyia longipalpis
miRNA family: mir-1224
source: miRNEST

Taxonomy by NCBI:
Lutzomyia longipalpis Lutzomyia Lutzomyia Phlebotominae Psychodidae Psychodoidea Psychodomorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCCCTCCTCCTCTCTCCACAT

miRNA*
GTGCGGTGGGGAGAAGGTTAC

mismatches: 5
bulges: 0

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pre-miRNA
CGCCCCTCATTATGAATCGCCCACCCCTGAGAGCAGAGTGTTCAAATAGGACCCCTCCTCCTCTCTCCACATAGACAGTGAGACCCATGTGCGGTGGGGA
GAAGGTTAC
TCCTCCCAGAGGAGTAGTCTG


dot-bracket secondary structure
.((...(((...)))...)).....((((.(((((...)))))...))))...(((.((((((.((.(((((..............))))).)).)))))
).))).(((
(((((...)))))))).....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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