miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Peromyscus maniculatus bairdii, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST009777
species: Peromyscus polionotus subgriseus
miRNA family: miR-1186
source: miRNEST

Taxonomy by NCBI:
Peromyscus polionotus subgriseus Peromyscus polionotus Peromyscus Neotominae Cricetidae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GAGTGCTGGGATTAAAGGAAT

miRNA*
TTCTCTGTTTAACAGCACTGGC

mismatches: 4
bulges: 1

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pre-miRNA
TCAAGACAGCGTTTCTCTGTTTAACAGCACTGGCTATCCTAGCTCTGTAGACCAGGCTGGCCTCGAACTCGCAGAGATCTGCCTGCCTCTGCTTTCTGAG
TGCTGGGATTAAAGGAAT
GTGCCACCA


dot-bracket secondary structure
........((((((((.((.((..((((((((((((...)))))..(((((.(((((.((.(((.........))).)).)))))..)))))......))
))))).)).)).))))))
)).......



SIMILARITIES
miRBase mmu-mir-3470a: 0.0000000000001

PMRD no hits

microPC no hits
UniProt no hits

RFAM 7SK: 0.000000007
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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