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Species belonging to selected taxon:
Nicotiana benthamiana
,
Nicotiana langsdorffii x Nicotiana sanderae
,
Nicotiana tabacum
ABOUT THIS RECORD
ID:
MNEST001638
species:
Nicotiana tabacum
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Nicotiana tabacum
Nicotiana
Nicotianeae
Nicotianoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAATACTCCCTCCGTTCCAAT
miRNA*
TGAAACGGAGAGAATATTCCT
mismatches:
5
bulges:
0
View larger
pre-miRNA
AAATCCTTAAA
TAATACTCCCTCCGTTCCAAT
TTGATTGAACCTATTTGGTTGGGCACAGAGTTTAAGAAAAAAGAGAAGACTTTTGAAACTTGTGGTCT
AAAATAATCCATAGATTTTAAAGTTAAATTGTTTCTAAATTTTGAAAGGGTTCATTCTTTTCGAAACTGACTAAAAAGAAAATAGGTTCATTCTTTT
TGA
AACGGAGAGAATATTCCT
TTATATGA
dot-bracket secondary structure
...........
.((((.((.(((((((.(((.
..((.(((((((((((..((((...(((...((.(((((...((...((((((.((((.((((((..(
(...))..)))))).))))))))))...)).))))).))(((((((((((.....)))))))))))))).)))).....))))))))))).))...)
)).
))))))).)).))))...
........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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