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Species belonging to selected taxon:

Brugia malayi, Onchocerca volvulus



ABOUT THIS RECORD

ID: MNEST038091
species: Brugia malayi
miRNA family: mir-81
source: miRBase, original name: bma-bantam (MI0013318)

Taxonomy by NCBI:
Brugia malayi Brugia Onchocercidae Filarioidea Spirurida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGATCATTGTGAAAGCTAT

miRNA*
GGCCTTCACCATGATCTACAGA

mismatches: 4
bulges: 1

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pre-miRNA
GGTGGGGGCAGTAGGCCTTCACCATGATCTACAGAATGCTATCATTTTGAGTCTGAGATCATTGTGAAAGCTATTTGCCTTCTACCGTCTC

dot-bracket secondary structure
(((((((((((..(((.(((((.(((((((.((((...(.........)..))))))))))).))))).)))..))))).)))))).....


SIMILARITIES
miRBase isc-bantam: 0.000004

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-81: 2e-45

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned

references

[1] Poole CB, Davis PJ, Jin J, McReynolds LA, Mol Biochem Parasitol. 169:87-94(2010)., "Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi"




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