ABOUT THIS RECORDspecies: Onychiurus arcticus
miRNA family: miR-4047
source: miRNEST
Taxonomy by NCBI:
Onychiurus arcticus Onychiurus Onychiurinae Onychiuridae Poduroidea Poduromorpha Collembola Ellipura Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAGTATCTGAGTGTTTCTG miRNA* GAATTCATCAGTGCTCCAGG mismatches: 4 bulges: 1 |
pre-miRNA
TTGCACTCGCCTGGAGTATCTGAGTGTTTCTGACAAAGTGAACCATCCTTGCATTTTGGATAGCTTTTTGACCCATTTACCTCCAAGTCTGAAAGGCTTG
AAATTTGACCTCCGTGATTTTCGTGATCTGATGGACTTAAATATGAGAAATGTCATGAGAGATGTAATGACAGAATTCATCAGTGCTCCAGGATCGAGAG
dot-bracket secondary structure
.....(((.(((((((((.((((....(((((.(((((((...........))))))).(((.(((..((((..((((..((((((((((...)))))))
..((((((..(((((((((.....))))..))))).))))))..))))))))))).)))...))).....)))))....)))))))))))))...)))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TTGCACTCGCCTGGAGTATCTGAGTGTTTCTGACAAAGTGAACCATCCTTGCATTTTGGATAGCTTTTTGACCCATTTACCTCCAAGTCTGAAAGGCTTG
AAATTTGACCTCCGTGATTTTCGTGATCTGATGGACTTAAATATGAGAAATGTCATGAGAGATGTAATGACAGAATTCATCAGTGCTCCAGGATCGAGAG
dot-bracket secondary structure
.....(((.(((((((((.((((....(((((.(((((((...........))))))).(((.(((..((((..((((..((((((((((...)))))))
..((((((..(((((((((.....))))..))))).))))))..))))))))))).)))...))).....)))))....)))))))))))))...)))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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