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Species belonging to selected taxon:

Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor



ABOUT THIS RECORD

ID: MNEST002766
species: Triphysaria pusilla
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Triphysaria pusilla Triphysaria Rhinantheae Orobanchaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTACTCCCTCCGTCCCAAA

miRNA*
 TGGGACCGAGGGAGTATTATA

mismatches: 3
bulges: 0
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pre-miRNA
 AAATGATTATGTTTTACTCCCTCCGTCCCAAAATGATTTTCCACTTTGCTATTAAATTTTATAGCAAAGTAGACAATCATTTTGGGACCGAGGGAGTATT
ATATATGGAAT

dot-bracket secondary structure
.......(((((..(((((((((.((((((((((((((.((.((((((((((........)))))))))).)).)))))))))))))).)))))))))..
)))))......


SIMILARITIES
miRBase tae-MIR1122: 0.0003

PMRD osa-miRf10569-akr: 0.00008

microPC miR1439: 0.0003		UniProt no hits

RFAM MIR1122: 0.0004		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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